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LLMs show promise for low-resource biomedical relation extraction

Researchers explored the use of large language models (LLMs) for few-shot biomedical relation extraction, a task crucial for structuring knowledge from biomedical literature. Their experiments on the BioREDirect dataset compared two LLM task formulations: pairwise classification and joint generation. While pairwise classification offered higher recall, joint generation proved more precise and efficient. The best LLM approach achieved a micro-F1 score of 0.44, surpassing prior few-shot results and demonstrating strong performance on rare relation types, though it fell short of fully supervised methods. AI

RANK_REASON Academic paper published on arXiv detailing a new research methodology. [lever_c_demoted from research: ic=1 ai=1.0]

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COVERAGE [1]

  1. arXiv cs.AI TIER_1 English(EN) · Jakob Mraz, Toma\v{z} Curk, Bla\v{z} Zupan ·

    Few-Shot Biomedical Relation Extraction with Large Language Models: A Viable Alternative to Supervised Learning?

    arXiv:2606.15412v1 Announce Type: cross Abstract: Biomedical relation extraction (BioRE) is a key step in transforming biomedical literature into structured knowledge. However, most existing approaches rely on supervised models trained on costly annotated datasets, limiting their…