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New AI framework YOTO streamlines gene subset selection for omics data

Researchers have developed YOTO, a novel end-to-end framework for identifying informative gene subsets from single-cell transcriptomic data. This approach integrates discrete gene selection and prediction within a single differentiable architecture, allowing the prediction task to directly guide gene selection. YOTO enforces sparsity, ensuring only selected genes contribute to inference and eliminating the need for separate downstream classifiers. The framework's multi-task learning design enables shared representations across objectives, improving generalization and performance on partially labeled datasets. AI

IMPACT Streamlines biomarker discovery and improves interpretability in omics data analysis.

RANK_REASON The cluster contains an academic paper detailing a new AI framework for a specific scientific domain. [lever_c_demoted from research: ic=1 ai=1.0]

Read on arXiv cs.AI →

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COVERAGE [1]

  1. arXiv cs.AI TIER_1 English(EN) · Daphn\'e Chopard, Jorge da Silva Gon\c{c}alves, Irene Cannistraci, Thomas M. Sutter, Julia E. Vogt ·

    You Only Train Once: Differentiable Subset Selection for Omics Data

    arXiv:2512.17678v2 Announce Type: replace-cross Abstract: Selecting compact and informative gene subsets from single-cell transcriptomic data is essential for biomarker discovery, improving interpretability, and cost-effective profiling. However, most existing feature selection a…