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HyInv model accelerates protein sequence design with improved accuracy

Researchers have developed HyInv, a new graph network model for inverse protein folding that can design diverse and well-folded amino acid sequences for a given protein backbone. Trained using the Hyra 2.0 research agent, HyInv utilizes a grouped draft-and-rewrite sampler to improve refolding scores while maintaining sequence diversity. This optimized implementation can design sequences significantly faster than existing methods on NVIDIA H20 GPUs and has demonstrated superior performance across multiple benchmark datasets compared to other baselines like ProteinMPNN and ProteinZero V2. AI

IMPACT This model could accelerate drug discovery and protein engineering by enabling faster and more accurate design of protein sequences.

RANK_REASON The item describes a new model and its performance on benchmark datasets, fitting the research category. [lever_c_demoted from research: ic=1 ai=1.0]

Read on Hugging Face Daily Papers →

AI-generated summary · Google Gemini · from 1 sources. How we write summaries →

HyInv model accelerates protein sequence design with improved accuracy

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The item describes a new model and its performance on benchmark datasets, fitting the research category. [lever_c_demoted from research: ic=1 ai=1.0]
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  1. Hugging Face Daily Papers TIER_1 English(EN) ·

    HyInv Technical Report

    Inverse folding designs amino-acid sequences for a given protein backbone, and screening needs many candidates that are both diverse and well folded. We present HyInv, a 1.96-million-parameter backbone-conditioned graph network with an encoder-decoder architecture, trained by Hyr…