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New VOICE model predicts gene expression from tissue images

Researchers have developed VOICE, a novel foundation model that integrates vision and omics data to predict single-cell gene expression from H&E stained tissue images. This model aligns cell morphology with gene expression embeddings, utilizing both direct regression and retrieval-based prediction branches. VOICE demonstrates strong generalization capabilities, outperforming previous methods on seven metrics across held-out patients and slides. AI

IMPACT This model could significantly advance biological research by enabling large-scale gene expression analysis from readily available tissue images.

RANK_REASON The cluster contains a research paper detailing a new foundation model for biological data analysis. [lever_c_demoted from research: ic=1 ai=1.0]

Read on arXiv cs.CV →

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New VOICE model predicts gene expression from tissue images

COVERAGE [1]

  1. arXiv cs.CV TIER_1 English(EN) · Xin Luo, Yicheng Tao, Haoxuan Zeng, Suyuan Wang, Chenzi Ouyang, Meiqi Zhu, Kai Liu, Shuibing Chen, Jie Liu ·

    VOICE: A Vision-Omics Foundation Model Integrating Direct and Retrieval-Based Prediction of In-situ Single-Cell Gene Expression

    arXiv:2608.08366v1 Announce Type: new Abstract: Spatial transcriptomics can resolve gene expression at single-cell resolution, but it is costly, limited to targeted panels of a few hundred to a few thousand genes, and applicable to only a small number of samples. H&E imaging,…